Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Gm27801-201ENSMUST00000184174 223 ntBASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Smad6-203ENSMUST00000179458 273 ntBASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15-2-dv6-2A0A075B650 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15-2-dv6-2A0A075B650 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms