Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Etf1-202ENSMUST00000180351 108 ntBASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4d-3A0A075B625 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Gm27502-201ENSMUST00000183495 199 ntBASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4d-3A0A075B625 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Gm10420-201ENSMUST00000121713 882 ntBASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4d-3A0A075B625 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Trav4d-3A0A075B625 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms