Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-1A0A075B606 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-1A0A075B606 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-1A0A075B606 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13d-1A0A075B606 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-1A0A075B606 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Rarb-207ENSMUST00000225921 2756 ntBASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-1A0A075B606 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Gm10653-202ENSMUST00000139570 835 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms