Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav1A0A075B5Z4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Trav1A0A075B5Z4 Gm6420-201ENSMUST00000193885 723 ntBASIC17.05■□□□□ 0.32
Trav1A0A075B5Z4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.05■□□□□ 0.32
Trav1A0A075B5Z4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav1A0A075B5Z4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav1A0A075B5Z4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Nespas-201ENSMUST00000143738 1083 ntBASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Fst-202ENSMUST00000223640 2612 ntBASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav1A0A075B5Z4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Gm22325-201ENSMUST00000158904 308 ntBASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav1A0A075B5Z4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav1A0A075B5Z4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav1A0A075B5Z4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav1A0A075B5Z4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav1A0A075B5Z4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trav1A0A075B5Z4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav1A0A075B5Z4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav1A0A075B5Z4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17■□□□□ 0.31
Trav1A0A075B5Z4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Gm7514-201ENSMUST00000209475 934 ntBASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav1A0A075B5Z4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav1A0A075B5Z4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms