Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm28949-201ENSMUST00000187805 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28773-201ENSMUST00000187925 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29319-201ENSMUST00000188060 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29422-201ENSMUST00000188062 694 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28734-201ENSMUST00000188104 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28787-201ENSMUST00000188357 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29312-201ENSMUST00000188724 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29451-201ENSMUST00000188862 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29637-201ENSMUST00000188877 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29033-201ENSMUST00000189114 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29614-201ENSMUST00000189263 694 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28751-201ENSMUST00000189287 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29559-201ENSMUST00000189412 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28272-201ENSMUST00000189512 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28483-201ENSMUST00000189519 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28123-201ENSMUST00000189725 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28368-201ENSMUST00000189804 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29119-201ENSMUST00000189973 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28716-201ENSMUST00000190217 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29239-201ENSMUST00000190304 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28837-201ENSMUST00000190397 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28968-201ENSMUST00000190413 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28531-201ENSMUST00000190529 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm28165-201ENSMUST00000190669 694 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm29181-201ENSMUST00000191288 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm38229-201ENSMUST00000191931 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm32347-201ENSMUST00000192944 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm38121-201ENSMUST00000193213 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm38035-201ENSMUST00000194427 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm38350-201ENSMUST00000194789 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm38170-201ENSMUST00000195404 816 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm37990-201ENSMUST00000195821 696 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm9710-201ENSMUST00000198053 499 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Atg4aQ8C9S8 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm15129-201ENSMUST00000119673 279 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm14796-201ENSMUST00000121216 959 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm12181-201ENSMUST00000121448 531 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm24680-201ENSMUST00000158759 126 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm9672-201ENSMUST00000166437 425 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm7891-201ENSMUST00000190284 843 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm8182-201ENSMUST00000197863 769 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm44705-201ENSMUST00000206719 339 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm9357-201ENSMUST00000207138 805 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm2398-201ENSMUST00000218347 883 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Mir484-201ENSMUST00000093566 67 ntBASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Atg4aQ8C9S8 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms