Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Gm28580-201ENSMUST00000186767 88 ntBASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Gm7412-201ENSMUST00000191692 605 ntBASIC7.67□□□□□ -1.18
Trim9Q8C7M3 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim9Q8C7M3 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm16357-201ENSMUST00000144091 474 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Mir1929-201ENSMUST00000158635 93 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm26959-201ENSMUST00000182376 978 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm20239-201ENSMUST00000196610 982 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm9710-201ENSMUST00000198053 499 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm8804-201ENSMUST00000212292 798 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm19056-201ENSMUST00000218220 797 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 AC154838.2-201ENSMUST00000226602 747 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Mir484-201ENSMUST00000093566 67 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Mir455-201ENSMUST00000093594 82 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.66□□□□□ -1.18
Trim9Q8C7M3 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim9Q8C7M3 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm5133-201ENSMUST00000118940 1255 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm11903-201ENSMUST00000118958 727 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm5319-201ENSMUST00000118965 873 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm12181-201ENSMUST00000121448 531 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm24756-201ENSMUST00000177002 96 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm27014-201ENSMUST00000182658 937 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Mir6241-201ENSMUST00000184225 103 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm29240-201ENSMUST00000187248 286 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm2860-201ENSMUST00000199226 707 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Gm7439-201ENSMUST00000214053 835 ntBASIC7.65□□□□□ -1.18
Trim9Q8C7M3 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim9Q8C7M3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms