Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm7499-201ENSMUST00000210423 813 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm24709-201ENSMUST00000104123 132 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm15709-201ENSMUST00000118354 213 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm20454-201ENSMUST00000172713 221 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm28846-201ENSMUST00000189161 368 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm18699-201ENSMUST00000190713 243 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm22126-201ENSMUST00000083244 142 ntBASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a6Q8C6K9 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ephx2-202ENSMUST00000224698 1985 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 AC123738.2-201ENSMUST00000223791 1899 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm12135-201ENSMUST00000119170 466 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm2986-201ENSMUST00000121603 382 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm24395-201ENSMUST00000158139 125 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a6Q8C6K9 Gm14733-201ENSMUST00000117680 133 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm12242-201ENSMUST00000118824 738 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm15242-201ENSMUST00000122459 283 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm22530-201ENSMUST00000158820 118 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Mir6403-201ENSMUST00000185007 129 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.3□□□□□ -1.4
Col6a6Q8C6K9 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms