Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pax9-203ENSMUST00000153250 4232 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Mns1-201ENSMUST00000034746 5250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm43504-201ENSMUST00000196056 2038 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Myzap-204ENSMUST00000169573 1393 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Lilrb4a-204ENSMUST00000078778 1381 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Cln3-202ENSMUST00000084589 3203 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 P2rx7-204ENSMUST00000121489 2576 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Mas1-209ENSMUST00000167152 1670 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm525-201ENSMUST00000100619 557 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Ptgds-202ENSMUST00000114251 830 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Zfp389-201ENSMUST00000118425 675 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm13627-201ENSMUST00000119700 706 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm12331-201ENSMUST00000119927 622 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm378-201ENSMUST00000120797 820 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm11295-201ENSMUST00000121379 803 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm8722-201ENSMUST00000121466 769 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm14514-201ENSMUST00000121680 940 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm11965-201ENSMUST00000122017 277 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm14990-201ENSMUST00000122354 445 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm26255-201ENSMUST00000122492 103 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Sap18-206ENSMUST00000143600 521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm14532-201ENSMUST00000156115 279 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Crb1-ps-201ENSMUST00000160441 895 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm22461-201ENSMUST00000175272 70 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm7083-201ENSMUST00000178617 450 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm26587-201ENSMUST00000180795 989 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Mir6411-201ENSMUST00000183556 108 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm27913-201ENSMUST00000184473 173 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm19280-201ENSMUST00000190191 205 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm2404-201ENSMUST00000196197 844 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.47□□□□□ -1.37
Foxc1Q61572 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Foxc1Q61572 AC155314.1-201ENSMUST00000227624 508 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 AC168062.2-201ENSMUST00000228907 422 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm25410-201ENSMUST00000083758 137 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm23345-201ENSMUST00000083817 150 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Krtap10-4-201ENSMUST00000092369 981 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Pex5l-201ENSMUST00000078226 3164 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm18901-201ENSMUST00000197840 1444 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Foxc1Q61572 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Mcm6-203ENSMUST00000190495 4355 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm44280-201ENSMUST00000204498 3111 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 AC115891.2-201ENSMUST00000218448 1341 ntBASIC6.47□□□□□ -1.37
Foxc1Q61572 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Pus3-201ENSMUST00000034615 2019 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms