Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm25617-201ENSMUST00000179548 133 ntBASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm25617-202ENSMUST00000198387 132 ntBASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm5119-201ENSMUST00000215858 634 ntBASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.33□□□□□ -1.08
Vps54Q5SPW0 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Vps54Q5SPW0 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm8192-201ENSMUST00000182196 958 ntBASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Mir7033-201ENSMUST00000184259 81 ntBASIC8.32□□□□□ -1.08
Vps54Q5SPW0 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps54Q5SPW0 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm25093-201ENSMUST00000103993 132 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm14612-201ENSMUST00000121522 881 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm26357-201ENSMUST00000158218 115 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm9167-201ENSMUST00000182469 962 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm29141-201ENSMUST00000190357 882 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm42673-201ENSMUST00000202676 337 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.31□□□□□ -1.08
Vps54Q5SPW0 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Vps54Q5SPW0 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms