Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC5.59□□□□□ -1.51
Sdc1P18828 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC5.59□□□□□ -1.51
Sdc1P18828 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sdc1P18828 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 AC157212.1-201ENSMUST00000228398 1075 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 AC166822.2-201ENSMUST00000228746 275 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sdc1P18828 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sdc1P18828 Krtap6-3-201ENSMUST00000079151 444 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sdc1P18828 Gm10540-201ENSMUST00000097581 276 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 Gm10581-201ENSMUST00000097986 231 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sdc1P18828 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.59□□□□□ -1.51
Sdc1P18828 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sdc1P18828 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sdc1P18828 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sdc1P18828 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sdc1P18828 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sdc1P18828 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
Sdc1P18828 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.59□□□□□ -1.52
Sdc1P18828 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.58□□□□□ -1.52
Sdc1P18828 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm26645-201ENSMUST00000181076 1316 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sdc1P18828 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm25232-201ENSMUST00000104502 132 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm21990-201ENSMUST00000124692 383 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm5656-201ENSMUST00000171020 1096 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm27542-201ENSMUST00000184184 256 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Tspy-ps-203ENSMUST00000186546 989 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC5.58□□□□□ -1.52
Sdc1P18828 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm8182-201ENSMUST00000197863 769 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm45246-201ENSMUST00000210820 367 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm4780-201ENSMUST00000213206 1242 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm8689-201ENSMUST00000218709 712 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm21321-201ENSMUST00000220179 446 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm18629-201ENSMUST00000222496 884 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Vmn1r41-204ENSMUST00000227039 985 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 AC137950.1-201ENSMUST00000228553 515 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Sdc1P18828 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Snora21-201ENSMUST00000082967 137 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sdc1P18828 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sdc1P18828 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.58□□□□□ -1.52
Sdc1P18828 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sdc1P18828 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Sdc1P18828 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sdc1P18828 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sdc1P18828 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Sdc1P18828 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms