Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm4956-202ENSMUST00000178869 672 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.04□□□□□ -1.44
UbbP0CG49 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.04□□□□□ -1.44
UbbP0CG49 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.04□□□□□ -1.44
UbbP0CG49 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.04□□□□□ -1.44
UbbP0CG49 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UbbP0CG49 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.04□□□□□ -1.44
UbbP0CG49 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UbbP0CG49 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.04□□□□□ -1.44
UbbP0CG49 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UbbP0CG49 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
UbbP0CG49 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
UbbP0CG49 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm12642-201ENSMUST00000121098 876 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm22311-201ENSMUST00000158006 110 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.03□□□□□ -1.44
UbbP0CG49 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm20549-201ENSMUST00000174804 429 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Gm28117-201ENSMUST00000188472 371 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Gm28413-201ENSMUST00000189369 291 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Gm6077-201ENSMUST00000196008 499 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm43656-201ENSMUST00000197882 434 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Gm18131-201ENSMUST00000199241 449 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Gm42472-201ENSMUST00000201626 859 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.03□□□□□ -1.44
UbbP0CG49 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
UbbP0CG49 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.03□□□□□ -1.44
UbbP0CG49 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
UbbP0CG49 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
UbbP0CG49 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UbbP0CG49 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.02□□□□□ -1.44
UbbP0CG49 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UbbP0CG49 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UbbP0CG49 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UbbP0CG49 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.02□□□□□ -1.45
UbbP0CG49 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.02□□□□□ -1.45
UbbP0CG49 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.02□□□□□ -1.45
UbbP0CG49 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.02□□□□□ -1.45
UbbP0CG49 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
UbbP0CG49 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
UbbP0CG49 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
UbbP0CG49 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms