Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm7270-201ENSMUST00000195818 1128 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 AC107663.1-201ENSMUST00000224257 468 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 AC161252.1-201ENSMUST00000225536 467 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Grik1-210ENSMUST00000228034 2708 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm8822-201ENSMUST00000118948 2347 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm12152-201ENSMUST00000122465 684 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm27299-201ENSMUST00000184593 103 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm5694-201ENSMUST00000195648 641 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm7554-201ENSMUST00000202282 574 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Gm44911-201ENSMUST00000208436 1062 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 AC104906.1-201ENSMUST00000218122 913 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 AC132833.4-201ENSMUST00000228313 203 ntBASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ccdc180J3QNE4 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 AC155298.3-201ENSMUST00000225307 3220 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm4806-201ENSMUST00000222704 1690 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm13176-201ENSMUST00000117910 477 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm23903-201ENSMUST00000157566 131 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm37349-201ENSMUST00000194205 624 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 AC157085.1-201ENSMUST00000216343 162 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Gm43728-201ENSMUST00000198817 2622 ntBASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc180J3QNE4 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm23430-201ENSMUST00000122490 314 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm24687-201ENSMUST00000157758 241 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm37637-201ENSMUST00000195540 1256 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm22351-201ENSMUST00000083925 107 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm43410-201ENSMUST00000197510 2234 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm37589-201ENSMUST00000193609 3994 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm37321-201ENSMUST00000195742 1872 ntBASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc180J3QNE4 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm12842-201ENSMUST00000117298 476 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm12438-201ENSMUST00000122034 336 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 n-R5s109-201ENSMUST00000179195 119 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm26509-201ENSMUST00000180947 948 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Mir7082-201ENSMUST00000183526 92 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm28586-201ENSMUST00000189857 456 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm37809-201ENSMUST00000195050 931 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm44075-201ENSMUST00000204208 216 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms