Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm37977-201ENSMUST00000193096 721 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm44561-201ENSMUST00000208869 264 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 AC112274.2-201ENSMUST00000218436 170 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 AC154649.2-201ENSMUST00000228189 808 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm22971-201ENSMUST00000083305 97 ntBASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube3bQ9ES34 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm24462-201ENSMUST00000102430 106 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm11318-201ENSMUST00000118640 961 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm4914-201ENSMUST00000119757 459 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm14053-201ENSMUST00000121662 470 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm24840-201ENSMUST00000122603 147 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Vis1-201ENSMUST00000183957 201 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm27332-201ENSMUST00000184893 112 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm8925-201ENSMUST00000197212 763 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm2622-201ENSMUST00000200018 471 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 AC161456.1-201ENSMUST00000206771 887 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm45767-201ENSMUST00000212778 4561 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm18510-201ENSMUST00000219335 1096 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 AC146596.1-201ENSMUST00000223507 223 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 AC154461.5-201ENSMUST00000225429 774 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 AC130673.1-201ENSMUST00000227992 435 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Ube3bQ9ES34 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ube3bQ9ES34 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms