Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44251-201ENSMUST00000204963 442 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm45739-201ENSMUST00000213094 388 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 AC132384.6-201ENSMUST00000218976 1206 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 AC158388.1-201ENSMUST00000225441 256 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Brf1Q8CFK2 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 AC163296.2-201ENSMUST00000220177 1315 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm17184-201ENSMUST00000111864 462 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 BC064078-201ENSMUST00000122939 570 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm8192-201ENSMUST00000182196 958 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm27014-201ENSMUST00000182658 937 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm42673-201ENSMUST00000202676 337 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm20136-201ENSMUST00000207501 891 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm44548-201ENSMUST00000208929 192 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm26130-201ENSMUST00000083171 138 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Brf1Q8CFK2 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm12439-201ENSMUST00000117162 365 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm25969-201ENSMUST00000157166 132 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm24422-201ENSMUST00000157800 119 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm2976-201ENSMUST00000160362 513 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm3760-201ENSMUST00000167475 804 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm9114-201ENSMUST00000188558 997 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 452.1 ms