Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm26264-201ENSMUST00000083278 159 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm232-201ENSMUST00000216549 2559 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim47Q8C0E3 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim47Q8C0E3 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.77□□□□□ -1
Trim47Q8C0E3 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim47Q8C0E3 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim47Q8C0E3 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Mir763-201ENSMUST00000103249 120 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm12851-201ENSMUST00000117920 421 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm11318-201ENSMUST00000118640 961 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm15572-201ENSMUST00000119248 593 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 BC002163-201ENSMUST00000121906 319 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm13194-201ENSMUST00000142299 311 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm18415-201ENSMUST00000177464 647 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm8529-201ENSMUST00000183298 745 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Mir8114-201ENSMUST00000183582 111 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm18033-201ENSMUST00000186678 550 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm44135-201ENSMUST00000205221 368 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm45299-201ENSMUST00000210199 420 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gm6477-201ENSMUST00000217098 764 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC154851.2-201ENSMUST00000222172 644 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 AC164092.3-201ENSMUST00000216970 1323 ntBASIC8.77□□□□□ -1.01
Trim47Q8C0E3 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Trim47Q8C0E3 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC153955.4-201ENSMUST00000217069 2752 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm15578-201ENSMUST00000117320 475 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm6491-201ENSMUST00000118273 990 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm11969-201ENSMUST00000118848 356 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm14016-201ENSMUST00000119095 486 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms