Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm13750-201ENSMUST00000117621 465 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm11976-201ENSMUST00000119236 295 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm12768-201ENSMUST00000120055 759 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm24719-201ENSMUST00000157520 110 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm27409-201ENSMUST00000184727 80 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm27601-201ENSMUST00000184794 127 ntBASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rif1Q6PR54 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Rif1Q6PR54 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.09□□□□□ -1.44
Rif1Q6PR54 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Rif1Q6PR54 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Rif1Q6PR54 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
Rif1Q6PR54 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Rif1Q6PR54 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm22371-201ENSMUST00000104588 130 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm14520-201ENSMUST00000119258 387 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm12983-201ENSMUST00000120974 310 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm3140-201ENSMUST00000163523 481 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm28883-201ENSMUST00000189256 369 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm37024-201ENSMUST00000192224 868 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm37135-201ENSMUST00000192652 534 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm44184-201ENSMUST00000204290 132 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm8999-201ENSMUST00000204951 969 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Snora44-201ENSMUST00000082670 129 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm15560-201ENSMUST00000117107 643 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Gm43459-201ENSMUST00000202093 331 ntBASIC6.08□□□□□ -1.44
Rif1Q6PR54 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Rif1Q6PR54 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Gm14521-201ENSMUST00000119545 350 ntBASIC6.07□□□□□ -1.44
Rif1Q6PR54 Gm12618-201ENSMUST00000121754 483 ntBASIC6.07□□□□□ -1.44
Rif1Q6PR54 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rif1Q6PR54 Gm7832-201ENSMUST00000202613 880 ntBASIC6.07□□□□□ -1.44
Rif1Q6PR54 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC6.07□□□□□ -1.44
Rif1Q6PR54 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.07□□□□□ -1.44
Rif1Q6PR54 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.07□□□□□ -1.44
Rif1Q6PR54 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC6.07□□□□□ -1.44
Rif1Q6PR54 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms