Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CiitaP79621 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CiitaP79621 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CiitaP79621 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.66□□□□□ -1.18
CiitaP79621 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CiitaP79621 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gm14466-201ENSMUST00000119028 451 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
CiitaP79621 Gm6142-201ENSMUST00000120290 325 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Gm13877-201ENSMUST00000120614 417 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Gm23888-201ENSMUST00000122690 253 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.66□□□□□ -1.18
CiitaP79621 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gm27156-201ENSMUST00000184589 754 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Mir8097-201ENSMUST00000185150 119 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Gm28958-201ENSMUST00000185864 703 ntBASIC7.66□□□□□ -1.18
CiitaP79621 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.66□□□□□ -1.18
CiitaP79621 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gm21054-201ENSMUST00000203981 380 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.66□□□□□ -1.18
CiitaP79621 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC7.66□□□□□ -1.18
CiitaP79621 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.66□□□□□ -1.18
CiitaP79621 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 AC101205.1-201ENSMUST00000227916 907 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gm24036-201ENSMUST00000082868 156 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Grik1-210ENSMUST00000228034 2708 ntBASIC7.66□□□□□ -1.18
CiitaP79621 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
CiitaP79621 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CiitaP79621 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 Gm12468-201ENSMUST00000116189 404 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm11882-201ENSMUST00000121463 506 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.65□□□□□ -1.18
CiitaP79621 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.65□□□□□ -1.18
CiitaP79621 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm5708-201ENSMUST00000196289 886 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Gm18430-201ENSMUST00000197534 682 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CiitaP79621 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Gm43906-201ENSMUST00000203194 906 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm9357-201ENSMUST00000207138 805 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CiitaP79621 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.65□□□□□ -1.18
CiitaP79621 AC073947.1-201ENSMUST00000216991 649 ntBASIC7.65□□□□□ -1.18
CiitaP79621 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.65□□□□□ -1.18
CiitaP79621 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CiitaP79621 Gm24451-201ENSMUST00000083353 133 ntBASIC7.65□□□□□ -1.18
CiitaP79621 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CiitaP79621 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
CiitaP79621 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.65□□□□□ -1.19
CiitaP79621 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CiitaP79621 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
CiitaP79621 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CiitaP79621 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CiitaP79621 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.64□□□□□ -1.19
CiitaP79621 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Gm45657-201ENSMUST00000211318 1349 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Gm14865-201ENSMUST00000117523 494 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms