Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm26436-201ENSMUST00000180325 132 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm28384-201ENSMUST00000189079 463 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm6750-201ENSMUST00000189273 268 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm21742-201ENSMUST00000189352 548 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm42861-201ENSMUST00000199596 634 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm18972-201ENSMUST00000218873 630 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 AC122539.2-201ENSMUST00000220207 404 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 AC207128.1-201ENSMUST00000225928 799 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm5590-201ENSMUST00000059110 345 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm22865-201ENSMUST00000083949 214 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Pcdh1F7BJK1 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm14356-201ENSMUST00000118322 869 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm12587-201ENSMUST00000120180 427 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm14380-201ENSMUST00000122298 431 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm22339-201ENSMUST00000157718 62 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm16558-201ENSMUST00000163015 532 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm3123-201ENSMUST00000163480 480 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm26738-201ENSMUST00000181312 601 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm26977-201ENSMUST00000183151 996 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm20819-201ENSMUST00000191091 925 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm37000-201ENSMUST00000193058 428 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm37328-201ENSMUST00000193191 640 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm19066-201ENSMUST00000193232 1078 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm6366-201ENSMUST00000198766 826 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 AC154738.3-201ENSMUST00000227953 409 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm9761-201ENSMUST00000075650 492 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm25259-201ENSMUST00000083048 193 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm10029-201ENSMUST00000089635 330 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 BC085271-201ENSMUST00000191852 1487 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms