Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Gm6887-201ENSMUST00000080945 482 ntBASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nup35Q8R4R6 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm37460-201ENSMUST00000191796 2249 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm42874-201ENSMUST00000198888 1774 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm18830-201ENSMUST00000199036 1396 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Mir708-201ENSMUST00000102189 109 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm13400-201ENSMUST00000117436 380 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm14727-201ENSMUST00000118526 525 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm11318-201ENSMUST00000118640 961 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm14721-201ENSMUST00000121381 525 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm22562-201ENSMUST00000157334 111 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm3208-201ENSMUST00000168281 427 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm5656-201ENSMUST00000171020 1096 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm4373-201ENSMUST00000178571 556 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Mir6337-201ENSMUST00000184194 105 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Mir6357-201ENSMUST00000184246 104 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm42977-201ENSMUST00000197497 144 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm30708-201ENSMUST00000202183 312 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm43926-201ENSMUST00000203978 430 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 AC153845.1-201ENSMUST00000213596 428 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Rpl32l-201ENSMUST00000216127 399 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 AC133948.2-201ENSMUST00000217850 378 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 CT030166.4-201ENSMUST00000220640 404 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 AC133189.3-201ENSMUST00000226269 878 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 AC140208.1-201ENSMUST00000226609 285 ntBASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup35Q8R4R6 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Gm38195-201ENSMUST00000194247 1499 ntBASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Gm10862-201ENSMUST00000193956 3350 ntBASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Nup35Q8R4R6 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms