Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm13900-201ENSMUST00000119402 498 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm15081-201ENSMUST00000119794 844 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm22552-201ENSMUST00000157796 337 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm17022-201ENSMUST00000166415 922 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Mir5100-201ENSMUST00000174993 64 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm23164-201ENSMUST00000175084 111 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm18848-201ENSMUST00000182069 792 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm9710-201ENSMUST00000198053 499 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm29759-201ENSMUST00000205860 327 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm25379-201ENSMUST00000104338 114 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm13221-201ENSMUST00000121712 430 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm16357-201ENSMUST00000144091 474 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm2860-201ENSMUST00000199226 707 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm8804-201ENSMUST00000212292 798 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm8275-201ENSMUST00000219732 424 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.15□□□□□ -1.26
Trub1Q8C0D0 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trub1Q8C0D0 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms