Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm38170-201ENSMUST00000195404 816 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm23011-202ENSMUST00000197855 275 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm3103-201ENSMUST00000198073 752 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm43558-201ENSMUST00000200155 210 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm44979-201ENSMUST00000206218 287 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm18226-201ENSMUST00000215261 521 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm26063-201ENSMUST00000083378 107 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm16020-201ENSMUST00000084281 210 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ctdp1Q7TSG2 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm22439-201ENSMUST00000104048 132 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Mir669e-201ENSMUST00000117003 119 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm7129-201ENSMUST00000117402 997 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm23657-201ENSMUST00000122623 294 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm23276-201ENSMUST00000157913 138 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm28164-201ENSMUST00000190143 442 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm4785-201ENSMUST00000191025 751 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm44566-201ENSMUST00000207638 304 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm5080-201ENSMUST00000220341 743 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.68□□□□□ -1.18
Ctdp1Q7TSG2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.67□□□□□ -1.18
Ctdp1Q7TSG2 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms