Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm23979-201ENSMUST00000104071 128 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm13183-201ENSMUST00000118615 789 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm15696-201ENSMUST00000121730 445 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm12540-201ENSMUST00000121938 319 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm14613-201ENSMUST00000122239 752 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm24781-201ENSMUST00000157636 117 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm26357-201ENSMUST00000158218 115 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm29509-201ENSMUST00000185716 321 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm37191-201ENSMUST00000193346 388 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm20223-201ENSMUST00000199932 805 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.94□□□□□ -1.14
Col2a1P28481 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Col2a1P28481 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.93□□□□□ -1.14
Col2a1P28481 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.93□□□□□ -1.14
Col2a1P28481 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm23768-201ENSMUST00000104440 131 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm15216-201ENSMUST00000118058 277 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm17044-201ENSMUST00000168549 828 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm6726-201ENSMUST00000172786 681 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 Mir3473g-201ENSMUST00000183494 136 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm27299-201ENSMUST00000184593 103 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm43048-201ENSMUST00000196101 388 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Gm2926-201ENSMUST00000205625 239 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.93□□□□□ -1.14
Col2a1P28481 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.93□□□□□ -1.14
Col2a1P28481 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.93□□□□□ -1.14
Col2a1P28481 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col2a1P28481 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col2a1P28481 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col2a1P28481 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm12439-201ENSMUST00000117162 365 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm20454-201ENSMUST00000172713 221 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col2a1P28481 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms