Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29470-201ENSMUST00000188007 696 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col1a1P11087 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.22□□□□□ -1.09
Col1a1P11087 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 AC153143.2-201ENSMUST00000220999 1804 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Dalir-201ENSMUST00000188773 2170 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.22□□□□□ -1.09
Col1a1P11087 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col1a1P11087 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Col1a1P11087 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.22□□□□□ -1.09
Col1a1P11087 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Col1a1P11087 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Col1a1P11087 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm25782-201ENSMUST00000122526 289 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC8.21□□□□□ -1.09
Col1a1P11087 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm26509-201ENSMUST00000180947 948 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm28023-201ENSMUST00000184556 60 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Gm27825-201ENSMUST00000184586 60 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Gm37322-201ENSMUST00000193409 337 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Gm44471-201ENSMUST00000197963 100 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.21□□□□□ -1.09
Col1a1P11087 Gm17849-201ENSMUST00000219788 853 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 AC105407.1-201ENSMUST00000225684 614 ntBASIC8.21□□□□□ -1.09
Col1a1P11087 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col1a1P11087 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Col1a1P11087 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.21□□□□□ -1.1
Col1a1P11087 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.21□□□□□ -1.1
Col1a1P11087 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Col1a1P11087 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.21□□□□□ -1.1
Col1a1P11087 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC8.21□□□□□ -1.1
Col1a1P11087 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col1a1P11087 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm14380-201ENSMUST00000122298 431 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Gm8648-201ENSMUST00000122457 221 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Gm26169-201ENSMUST00000158420 135 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 n-R5s109-201ENSMUST00000179195 119 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms