Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Hoxc8P09025 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Hoxc8P09025 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.57□□□□□ -1.2
Hoxc8P09025 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.57□□□□□ -1.2
Hoxc8P09025 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Hoxc8P09025 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Hoxc8P09025 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm26340-201ENSMUST00000102365 99 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm12369-201ENSMUST00000121343 942 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm22990-201ENSMUST00000175427 89 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm6077-201ENSMUST00000196008 499 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm43212-201ENSMUST00000198208 394 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm43141-201ENSMUST00000199695 274 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Hoxc8P09025 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm43621-201ENSMUST00000202733 2022 ntBASIC7.56□□□□□ -1.2
Hoxc8P09025 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Hoxc8P09025 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Hoxc8P09025 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Hoxc8P09025 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Hoxc8P09025 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Hoxc8P09025 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.55□□□□□ -1.2
Hoxc8P09025 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm22267-201ENSMUST00000104008 131 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm23979-201ENSMUST00000104071 128 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Hoxc8P09025 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm12439-201ENSMUST00000117162 365 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm13357-201ENSMUST00000120528 537 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Hoxc8P09025 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Hoxc8P09025 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm35323-201ENSMUST00000191836 499 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Gm37189-201ENSMUST00000192131 298 ntBASIC7.55□□□□□ -1.2
Hoxc8P09025 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms