Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mir1960-201ENSMUST00000157488 78 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gm22523-201ENSMUST00000158696 100 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gm27512-201ENSMUST00000175328 126 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.43□□□□□ -1.06
Col4a1P02463 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm38574-201ENSMUST00000211855 640 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.43□□□□□ -1.06
Col4a1P02463 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 AC147782.1-201ENSMUST00000219169 475 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Col4a1P02463 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Col4a1P02463 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.43□□□□□ -1.06
Col4a1P02463 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm23748-201ENSMUST00000104227 131 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.43□□□□□ -1.06
Col4a1P02463 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC8.43□□□□□ -1.06
Col4a1P02463 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm18586-201ENSMUST00000217265 518 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.43□□□□□ -1.06
Col4a1P02463 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col4a1P02463 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm26442-201ENSMUST00000082588 153 ntBASIC8.43□□□□□ -1.06
Col4a1P02463 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col4a1P02463 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col4a1P02463 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Gm28653-201ENSMUST00000185494 5276 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm38273-201ENSMUST00000194987 2382 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm26509-201ENSMUST00000180947 948 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Gm27601-201ENSMUST00000184794 127 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.42□□□□□ -1.06
Col4a1P02463 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 AC170086.2-201ENSMUST00000224733 803 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Olfr687-201ENSMUST00000098154 938 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.42□□□□□ -1.06
Col4a1P02463 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Col4a1P02463 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col4a1P02463 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col4a1P02463 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms