Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm5080-201ENSMUST00000220341 743 ntBASIC6.63□□□□□ -1.35
Use1Q9CQ56 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.63□□□□□ -1.35
Use1Q9CQ56 Gm36758-201ENSMUST00000222594 310 ntBASIC6.63□□□□□ -1.35
Use1Q9CQ56 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.63□□□□□ -1.35
Use1Q9CQ56 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.63□□□□□ -1.35
Use1Q9CQ56 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Use1Q9CQ56 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Use1Q9CQ56 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Use1Q9CQ56 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.63□□□□□ -1.35
Use1Q9CQ56 Gm22053-201ENSMUST00000083394 200 ntBASIC6.63□□□□□ -1.35
Use1Q9CQ56 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Use1Q9CQ56 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.63□□□□□ -1.35
Use1Q9CQ56 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm23485-201ENSMUST00000104181 155 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm13137-201ENSMUST00000118035 345 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm15081-201ENSMUST00000119794 844 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm15160-201ENSMUST00000120553 907 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm12499-201ENSMUST00000121961 546 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm24893-201ENSMUST00000122745 369 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm10086-201ENSMUST00000136334 354 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm23276-201ENSMUST00000157913 138 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm24883-201ENSMUST00000158391 281 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm38305-201ENSMUST00000194825 223 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.62□□□□□ -1.35
Use1Q9CQ56 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Use1Q9CQ56 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm24373-201ENSMUST00000104393 132 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm11688-201ENSMUST00000122145 308 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm22311-201ENSMUST00000158006 110 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm28064-201ENSMUST00000185639 858 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm29354-201ENSMUST00000187613 696 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm42580-201ENSMUST00000197223 753 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 Gm10416-201ENSMUST00000197379 645 ntBASIC6.61□□□□□ -1.35
Use1Q9CQ56 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms