Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm45446-201ENSMUST00000209348 216 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm8275-201ENSMUST00000219732 424 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 CT025552.1-201ENSMUST00000224561 521 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Grik1-209ENSMUST00000227986 2942 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm24682-201ENSMUST00000158764 137 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm29369-201ENSMUST00000190674 615 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm19080-201ENSMUST00000196082 550 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm44192-201ENSMUST00000204195 556 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.32□□□□□ -1.08
Vps53Q8CCB4 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Vps53Q8CCB4 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm23437-201ENSMUST00000104036 127 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm26419-201ENSMUST00000104272 133 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Mir8094-201ENSMUST00000183361 117 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm43147-201ENSMUST00000196944 542 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm34583-203ENSMUST00000202586 454 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm23054-201ENSMUST00000082804 162 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms