Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm22774-201ENSMUST00000102084 109 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm13930-201ENSMUST00000118569 368 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm23891-201ENSMUST00000158114 138 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm17217-201ENSMUST00000166613 469 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm17212-201ENSMUST00000166666 259 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm7891-201ENSMUST00000190284 843 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm2221-201ENSMUST00000209342 418 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm32899-201ENSMUST00000219694 207 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trub1Q8C0D0 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm25546-201ENSMUST00000103977 132 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm17184-201ENSMUST00000111864 462 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm14466-201ENSMUST00000119028 451 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 BC064078-201ENSMUST00000122939 570 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm26183-201ENSMUST00000157685 139 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm23018-201ENSMUST00000177928 109 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm9604-201ENSMUST00000211175 433 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 AC157212.1-201ENSMUST00000228398 1075 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Mir484-201ENSMUST00000093566 67 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trub1Q8C0D0 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trub1Q8C0D0 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms