Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox3P53784 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Gm38574-201ENSMUST00000211855 640 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox3P53784 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox3P53784 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Gm37510-201ENSMUST00000194151 4762 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.84□□□□□ -1.32
Sox3P53784 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Sox3P53784 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.84□□□□□ -1.32
Sox3P53784 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Sox3P53784 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
Sox3P53784 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Sox3P53784 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm44509-201ENSMUST00000205400 1324 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.83□□□□□ -1.32
Sox3P53784 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm22284-201ENSMUST00000104132 132 ntBASIC6.83□□□□□ -1.32
Sox3P53784 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm7494-201ENSMUST00000121248 441 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm12175-201ENSMUST00000122081 345 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm11188-201ENSMUST00000122382 388 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm22342-201ENSMUST00000122647 298 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Mir3078-201ENSMUST00000175231 87 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm7341-201ENSMUST00000192183 926 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm20128-201ENSMUST00000196189 417 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.83□□□□□ -1.32
Sox3P53784 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.83□□□□□ -1.32
Sox3P53784 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Sox3P53784 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm22504-201ENSMUST00000082963 139 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Sox3P53784 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox3P53784 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.83□□□□□ -1.32
Sox3P53784 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Sox3P53784 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.83□□□□□ -1.32
Sox3P53784 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Sox3P53784 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox3P53784 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.82□□□□□ -1.32
Sox3P53784 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Sox3P53784 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms