Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HttP42859 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.16□□□□□ -1.26
HttP42859 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
HttP42859 Gm42427-201ENSMUST00000200473 5292 ntBASIC7.16□□□□□ -1.26
HttP42859 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Gm16536-201ENSMUST00000162209 1589 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm22277-201ENSMUST00000157204 277 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm23408-201ENSMUST00000158523 265 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm22523-201ENSMUST00000158696 100 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm17142-201ENSMUST00000164933 645 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm27018-201ENSMUST00000181136 225 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm8192-201ENSMUST00000182196 958 ntBASIC7.16□□□□□ -1.26
HttP42859 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.16□□□□□ -1.26
HttP42859 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.16□□□□□ -1.26
HttP42859 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
HttP42859 Gm22592-201ENSMUST00000104242 131 ntBASIC7.16□□□□□ -1.26
HttP42859 Mir1188-201ENSMUST00000116756 120 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm15781-201ENSMUST00000120216 323 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm25374-201ENSMUST00000158158 101 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm7335-201ENSMUST00000172475 373 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm37841-201ENSMUST00000195367 376 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.16□□□□□ -1.26
HttP42859 LOC665443-201ENSMUST00000212284 796 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm19256-201ENSMUST00000218550 231 ntBASIC7.16□□□□□ -1.26
HttP42859 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC7.16□□□□□ -1.26
HttP42859 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
HttP42859 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
HttP42859 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Gm12442-201ENSMUST00000118372 338 ntBASIC7.15□□□□□ -1.26
HttP42859 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Gm23250-201ENSMUST00000157444 267 ntBASIC7.15□□□□□ -1.26
HttP42859 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.15□□□□□ -1.26
HttP42859 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC7.15□□□□□ -1.26
HttP42859 Gm44604-201ENSMUST00000205475 496 ntBASIC7.15□□□□□ -1.26
HttP42859 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.15□□□□□ -1.26
HttP42859 Gm33601-201ENSMUST00000210001 961 ntBASIC7.15□□□□□ -1.26
HttP42859 n-R5s204-201ENSMUST00000082972 119 ntBASIC7.15□□□□□ -1.26
HttP42859 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HttP42859 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.15□□□□□ -1.26
HttP42859 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.15□□□□□ -1.26
HttP42859 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HttP42859 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HttP42859 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.15□□□□□ -1.26
HttP42859 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
HttP42859 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.15□□□□□ -1.26
HttP42859 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HttP42859 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.15□□□□□ -1.26
HttP42859 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
HttP42859 Klra13-ps-201ENSMUST00000125813 802 ntBASIC7.15□□□□□ -1.27
HttP42859 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.15□□□□□ -1.27
HttP42859 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.15□□□□□ -1.27
HttP42859 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
HttP42859 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.15□□□□□ -1.27
HttP42859 Mir337-201ENSMUST00000083592 97 ntBASIC7.15□□□□□ -1.27
HttP42859 Gm25682-201ENSMUST00000083942 164 ntBASIC7.15□□□□□ -1.27
HttP42859 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
HttP42859 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
HttP42859 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC7.15□□□□□ -1.27
HttP42859 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HttP42859 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
HttP42859 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC7.15□□□□□ -1.27
HttP42859 Gm8320-201ENSMUST00000177584 1762 ntBASIC7.15□□□□□ -1.27
HttP42859 Gm8303-201ENSMUST00000178371 1762 ntBASIC7.15□□□□□ -1.27
HttP42859 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms