Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm24590-201ENSMUST00000116699 119 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Calr-ps-201ENSMUST00000121776 485 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm14380-201ENSMUST00000122298 431 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm37293-201ENSMUST00000191658 295 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.24□□□□□ -0.93
Col18a1P39061 AL713985.1-201ENSMUST00000219030 420 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Col18a1P39061 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Gm42462-201ENSMUST00000196543 1363 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Gm15332-201ENSMUST00000118386 357 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm12402-201ENSMUST00000120536 334 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Gm25906-201ENSMUST00000158489 126 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm7891-201ENSMUST00000190284 843 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Gm42584-201ENSMUST00000201404 220 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC9.24□□□□□ -0.93
Col18a1P39061 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Col18a1P39061 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Col18a1P39061 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Gm43637-201ENSMUST00000202206 2926 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col18a1P39061 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC9.24□□□□□ -0.93
Col18a1P39061 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col18a1P39061 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Amy2b-201ENSMUST00000120184 1577 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Peg13-201ENSMUST00000202826 4725 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm37549-201ENSMUST00000194096 4065 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm13451-201ENSMUST00000117649 592 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Gm15967-201ENSMUST00000120027 1116 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Gm14613-201ENSMUST00000122239 752 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm23799-201ENSMUST00000175559 120 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col18a1P39061 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm27024-201ENSMUST00000182561 755 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Prl7a1-203ENSMUST00000224852 1283 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm37735-201ENSMUST00000193995 1406 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC9.23□□□□□ -0.93
Col18a1P39061 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Gm37255-201ENSMUST00000193302 3060 ntBASIC9.23□□□□□ -0.93
Col18a1P39061 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col18a1P39061 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col18a1P39061 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms