Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC154597.1-201ENSMUST00000224095 2713 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm13702-201ENSMUST00000118542 825 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm11107-201ENSMUST00000165414 505 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm9315-201ENSMUST00000222696 908 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 AC132260.1-201ENSMUST00000225499 734 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 CT010514.1-201ENSMUST00000214088 2969 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 AC116476.1-201ENSMUST00000226274 2318 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm42490-201ENSMUST00000198595 2064 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm14202-201ENSMUST00000120121 311 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm13578-201ENSMUST00000120849 590 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm36935-201ENSMUST00000192526 292 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm42443-201ENSMUST00000198084 1155 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm5154-201ENSMUST00000203971 399 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 AC163684.1-201ENSMUST00000223766 927 ntBASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc180J3QNE4 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm9839-201ENSMUST00000195252 1437 ntBASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm5125-201ENSMUST00000148614 624 ntBASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm26357-201ENSMUST00000158218 115 ntBASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm43689-201ENSMUST00000195951 427 ntBASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 AC153557.1-201ENSMUST00000217697 403 ntBASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc180J3QNE4 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm12447-201ENSMUST00000119110 470 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Mir1953-201ENSMUST00000157866 89 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm20530-201ENSMUST00000174261 254 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm21301-201ENSMUST00000189476 699 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm46203-201ENSMUST00000218130 478 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 AC161374.1-201ENSMUST00000224191 794 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 AC105324.1-201ENSMUST00000227844 386 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 n-R5s97-201ENSMUST00000082585 113 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Dennd6a-204ENSMUST00000224248 2775 ntBASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc180J3QNE4 Gm43681-201ENSMUST00000201581 1903 ntBASIC12.77□□□□□ -0.37
Ccdc180J3QNE4 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc180J3QNE4 C78859-201ENSMUST00000212800 5943 ntBASIC12.77□□□□□ -0.37
Ccdc180J3QNE4 Gm45537-201ENSMUST00000211539 2708 ntBASIC12.77□□□□□ -0.37
Ccdc180J3QNE4 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc180J3QNE4 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc180J3QNE4 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms