Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Upk3aQ9JKX8 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 AC124572.1-201ENSMUST00000218155 2406 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm25311-201ENSMUST00000104136 132 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Mir1929-201ENSMUST00000158635 93 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm24756-201ENSMUST00000177002 96 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm26570-201ENSMUST00000180672 342 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm8192-201ENSMUST00000182196 958 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm44112-201ENSMUST00000204787 372 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm20136-201ENSMUST00000207501 891 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Upk3aQ9JKX8 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm17217-201ENSMUST00000166613 469 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm27178-201ENSMUST00000184962 340 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm29357-201ENSMUST00000186877 698 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm9114-201ENSMUST00000188558 997 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Upk3aQ9JKX8 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm25396-201ENSMUST00000103981 133 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms