Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scrt1Q99M85 Gm37510-201ENSMUST00000194151 4762 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.29□□□□□ -1.4
Scrt1Q99M85 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm45354-201ENSMUST00000199820 2557 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm25379-201ENSMUST00000104338 114 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm5228-201ENSMUST00000117186 357 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm11858-201ENSMUST00000117935 838 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm15188-201ENSMUST00000121264 704 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm12634-201ENSMUST00000122157 992 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm25780-201ENSMUST00000122528 253 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm22847-201ENSMUST00000157707 105 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm4202-201ENSMUST00000169025 733 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm8609-201ENSMUST00000182967 998 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm412-201ENSMUST00000193360 948 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm7804-202ENSMUST00000194187 854 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm10123-201ENSMUST00000075723 490 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scrt1Q99M85 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.28□□□□□ -1.4
Scrt1Q99M85 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scrt1Q99M85 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.27□□□□□ -1.4
Scrt1Q99M85 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm2178-201ENSMUST00000104927 357 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm22953-201ENSMUST00000116724 101 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm13176-201ENSMUST00000117910 477 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms