Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps53Q8CCB4 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm13156-201ENSMUST00000118348 321 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm5255-201ENSMUST00000120125 642 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm22262-201ENSMUST00000158713 86 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm23018-201ENSMUST00000177928 109 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm43396-201ENSMUST00000197506 706 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm8182-201ENSMUST00000197863 769 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm8479-201ENSMUST00000203825 718 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm44258-201ENSMUST00000204925 301 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Vps53Q8CCB4 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.08
Vps53Q8CCB4 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Vps53Q8CCB4 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Vps53Q8CCB4 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm7821-201ENSMUST00000117111 788 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm23657-201ENSMUST00000122623 294 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm26321-201ENSMUST00000157740 242 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Mir6908-201ENSMUST00000184056 63 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Mir8120-201ENSMUST00000185035 139 ntBASIC8.33□□□□□ -1.08
Vps53Q8CCB4 Gm28428-201ENSMUST00000188886 697 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms