Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mir688-201ENSMUST00000102055 75 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm13137-201ENSMUST00000118035 345 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm14913-201ENSMUST00000120011 1093 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm16248-201ENSMUST00000124238 243 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm10157-201ENSMUST00000139408 343 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm28941-201ENSMUST00000185536 1017 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm29357-201ENSMUST00000186877 698 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Prl7a1-203ENSMUST00000224852 1283 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.75□□□□□ -1.17
Trim9Q8C7M3 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm14584-201ENSMUST00000118956 637 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm14603-201ENSMUST00000121275 448 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm23392-201ENSMUST00000157580 113 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm4308-201ENSMUST00000179735 914 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm17786-201ENSMUST00000182000 427 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm27596-201ENSMUST00000185061 83 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm43108-201ENSMUST00000200525 293 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm44380-201ENSMUST00000203125 293 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm5305-201ENSMUST00000204010 746 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm22053-201ENSMUST00000083394 200 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm42478-201ENSMUST00000199252 1467 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim9Q8C7M3 AC124572.1-201ENSMUST00000218155 2406 ntBASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm26417-201ENSMUST00000104274 135 ntBASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm25498-201ENSMUST00000104424 129 ntBASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim9Q8C7M3 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms