Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Gm8662-201ENSMUST00000118644 574 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm12740-201ENSMUST00000118794 308 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm12844-201ENSMUST00000119463 582 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm13430-201ENSMUST00000121366 288 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm24286-201ENSMUST00000157632 128 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm6055-201ENSMUST00000180532 378 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm43576-201ENSMUST00000197937 871 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm8607-201ENSMUST00000221864 431 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm10221-201ENSMUST00000088299 309 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm25904-201ENSMUST00000158491 143 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm24545-201ENSMUST00000158651 85 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm38122-201ENSMUST00000192679 885 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm2229-201ENSMUST00000193328 710 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm37841-201ENSMUST00000195367 376 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm44091-201ENSMUST00000205212 649 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm9367-201ENSMUST00000205703 546 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Klf10-202ENSMUST00000226363 2917 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Gm26967-201ENSMUST00000182878 2303 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.39□□□□□ -1.39
Col6a6Q8C6K9 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Mir697-201ENSMUST00000102316 109 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm26429-201ENSMUST00000104829 110 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm11501-201ENSMUST00000118039 581 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm5601-201ENSMUST00000118909 972 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm18006-201ENSMUST00000177411 662 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm21542-201ENSMUST00000182307 993 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Mir425-201ENSMUST00000083645 85 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm38001-201ENSMUST00000192900 3761 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm38339-201ENSMUST00000195479 1829 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Malat1-201ENSMUST00000172812 6983 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms