Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ClpbQ60649 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ClpbQ60649 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ClpbQ60649 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ClpbQ60649 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
ClpbQ60649 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ClpbQ60649 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
ClpbQ60649 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm25631-201ENSMUST00000104390 130 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm11850-201ENSMUST00000119679 479 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm15644-201ENSMUST00000121764 387 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Pea15b-201ENSMUST00000182806 387 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Mir8094-201ENSMUST00000183361 117 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm6472-202ENSMUST00000187973 582 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm38079-201ENSMUST00000195603 154 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm18562-201ENSMUST00000209949 915 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm18860-201ENSMUST00000212029 764 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm46311-201ENSMUST00000217971 203 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ClpbQ60649 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.86□□□□□ -1.31
ClpbQ60649 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ClpbQ60649 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ClpbQ60649 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ClpbQ60649 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ClpbQ60649 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ClpbQ60649 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm25916-201ENSMUST00000104263 131 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm8916-201ENSMUST00000119732 949 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm18848-201ENSMUST00000182069 792 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm37490-201ENSMUST00000195566 724 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ClpbQ60649 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.85□□□□□ -1.31
ClpbQ60649 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm6581-201ENSMUST00000214545 260 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm19217-201ENSMUST00000218238 328 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms