Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.51□□□□□ -0.89
Nphp4P59240 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nphp4P59240 Gm42577-201ENSMUST00000201367 3211 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Nphp4P59240 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nphp4P59240 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.5□□□□□ -0.89
Nphp4P59240 AC161247.1-201ENSMUST00000217744 2295 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nphp4P59240 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm11622-201ENSMUST00000120525 691 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm15750-201ENSMUST00000120970 616 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm25435-201ENSMUST00000158277 267 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm5345-201ENSMUST00000183076 1014 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm19185-201ENSMUST00000196365 643 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm18040-201ENSMUST00000217922 827 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm46203-201ENSMUST00000218130 478 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC9.5□□□□□ -0.89
Nphp4P59240 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Nphp4P59240 Mir425-201ENSMUST00000083645 85 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.5□□□□□ -0.89
Nphp4P59240 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm15789-201ENSMUST00000118992 1359 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm43789-201ENSMUST00000199275 2472 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.5□□□□□ -0.89
Nphp4P59240 Gm9226-201ENSMUST00000188352 3489 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm21152-201ENSMUST00000190271 3483 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Gm43410-201ENSMUST00000197510 2234 ntBASIC9.5□□□□□ -0.89
Nphp4P59240 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nphp4P59240 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC9.49□□□□□ -0.89
Nphp4P59240 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm18752-201ENSMUST00000192876 608 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm43867-201ENSMUST00000203860 525 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm45693-201ENSMUST00000211391 1157 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 Gm45899-201ENSMUST00000212196 1276 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 CT010453.2-201ENSMUST00000227005 483 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 AC135086.1-201ENSMUST00000228621 817 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm25587-201ENSMUST00000082498 166 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Rian-209ENSMUST00000182406 3476 ntBASIC9.49□□□□□ -0.89
Nphp4P59240 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
Nphp4P59240 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nphp4P59240 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nphp4P59240 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nphp4P59240 Gm12439-201ENSMUST00000117162 365 ntBASIC9.48□□□□□ -0.89
Nphp4P59240 Gm12939-201ENSMUST00000117303 165 ntBASIC9.48□□□□□ -0.89
Nphp4P59240 Gm12135-201ENSMUST00000119170 466 ntBASIC9.48□□□□□ -0.89
Nphp4P59240 Gm8312-201ENSMUST00000119380 618 ntBASIC9.48□□□□□ -0.89
Nphp4P59240 Gm13357-201ENSMUST00000120528 537 ntBASIC9.48□□□□□ -0.89
Nphp4P59240 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nphp4P59240 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms