Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm17611-202ENSMUST00000220613 814 ntBASIC6.86□□□□□ -1.31
Sox3P53784 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.86□□□□□ -1.31
Sox3P53784 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Sox3P53784 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Sox3P53784 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Sox3P53784 Gm6654-201ENSMUST00000118950 348 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm11928-201ENSMUST00000119323 437 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm13900-201ENSMUST00000119402 498 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm16523-201ENSMUST00000121253 592 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm13669-201ENSMUST00000122366 457 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.85□□□□□ -1.31
Sox3P53784 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Sox3P53784 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.85□□□□□ -1.31
Sox3P53784 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.85□□□□□ -1.31
Sox3P53784 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.85□□□□□ -1.31
Sox3P53784 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.85□□□□□ -1.31
Sox3P53784 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Sox3P53784 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Sox3P53784 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.85□□□□□ -1.31
Sox3P53784 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox3P53784 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox3P53784 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
Sox3P53784 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Sox3P53784 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox3P53784 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox3P53784 Gm11341-201ENSMUST00000122316 447 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox3P53784 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.84□□□□□ -1.31
Sox3P53784 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox3P53784 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox3P53784 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox3P53784 Gm29385-201ENSMUST00000186831 363 ntBASIC6.84□□□□□ -1.31
Sox3P53784 Gm29562-201ENSMUST00000190113 904 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms