Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm5752-201ENSMUST00000117771 594 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm13038-201ENSMUST00000119886 459 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm24893-201ENSMUST00000122745 369 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm24139-201ENSMUST00000122780 288 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm22206-201ENSMUST00000158612 116 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm7991-201ENSMUST00000168668 591 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm6536-201ENSMUST00000171180 615 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox6P40645 Gm28142-201ENSMUST00000186899 698 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Gm3103-201ENSMUST00000198073 752 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Gm6885-201ENSMUST00000217261 372 ntBASIC6.62□□□□□ -1.35
Sox6P40645 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Olfr890-201ENSMUST00000079804 945 ntBASIC6.62□□□□□ -1.35
Sox6P40645 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Sox6P40645 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.62□□□□□ -1.35
Sox6P40645 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.62□□□□□ -1.35
Sox6P40645 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox6P40645 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Gm23834-201ENSMUST00000104436 129 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
Sox6P40645 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm15054-201ENSMUST00000117393 281 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm13137-201ENSMUST00000118035 345 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm11928-201ENSMUST00000119323 437 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm11945-201ENSMUST00000120551 476 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm12630-201ENSMUST00000121575 784 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm21182-201ENSMUST00000178899 794 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Mir7029-201ENSMUST00000184777 61 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Mir6409-201ENSMUST00000184957 92 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox6P40645 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm43929-201ENSMUST00000203025 409 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm44192-201ENSMUST00000204195 556 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm18690-201ENSMUST00000204488 985 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.61□□□□□ -1.35
Sox6P40645 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Sox6P40645 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.61□□□□□ -1.35
Sox6P40645 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox6P40645 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox6P40645 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.6□□□□□ -1.35
Sox6P40645 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox6P40645 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms