Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm12438-201ENSMUST00000122034 336 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm26410-201ENSMUST00000157670 261 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm26509-201ENSMUST00000180947 948 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm5260-201ENSMUST00000186157 949 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm36935-201ENSMUST00000192526 292 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm18430-201ENSMUST00000197534 682 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm4083-201ENSMUST00000207158 451 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm27653-201ENSMUST00000185037 136 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm43392-201ENSMUST00000196560 434 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm43233-201ENSMUST00000200491 616 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Gm9293-201ENSMUST00000223096 306 ntBASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col4a6B1AVK5 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Col4a6B1AVK5 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col4a6B1AVK5 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm13489-201ENSMUST00000121234 971 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm13462-201ENSMUST00000121472 961 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm12833-201ENSMUST00000136112 477 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm3076-201ENSMUST00000161613 451 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm37135-201ENSMUST00000192652 534 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm38097-201ENSMUST00000192936 439 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm38237-201ENSMUST00000193366 376 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm19185-201ENSMUST00000196365 643 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm7463-201ENSMUST00000201541 547 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm45782-201ENSMUST00000212670 366 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gm17849-201ENSMUST00000219788 853 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Col4a6B1AVK5 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms