Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm12439-201ENSMUST00000117162 365 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm11445-201ENSMUST00000119101 532 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm27295-201ENSMUST00000184264 153 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm43772-201ENSMUST00000202052 379 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm43867-201ENSMUST00000203860 525 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm18040-201ENSMUST00000217922 827 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm45191-201ENSMUST00000205846 5439 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm10416-201ENSMUST00000197379 645 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm4202-201ENSMUST00000169025 733 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm18430-201ENSMUST00000197534 682 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm5928-201ENSMUST00000221839 466 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.81□□□□□ -1.16
Scn3aA2ASI5 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Scn3aA2ASI5 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm23768-201ENSMUST00000104440 131 ntBASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm5843-201ENSMUST00000121631 476 ntBASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm9285-201ENSMUST00000177691 697 ntBASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm28413-201ENSMUST00000189369 291 ntBASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Gm6575-201ENSMUST00000222946 697 ntBASIC7.8□□□□□ -1.16
Scn3aA2ASI5 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Scn3aA2ASI5 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms