Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm15105-201ENSMUST00000117777 204 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm12825-201ENSMUST00000120249 563 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm15481-201ENSMUST00000120264 539 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm11440-201ENSMUST00000121509 527 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm12504-202ENSMUST00000148026 306 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm6100-201ENSMUST00000180253 403 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm43471-201ENSMUST00000197550 467 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm8539-201ENSMUST00000199822 501 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm2505-201ENSMUST00000200413 825 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm18268-201ENSMUST00000208445 943 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col8a1Q00780 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm9985-201ENSMUST00000044101 510 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm43800-201ENSMUST00000201868 2731 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Zfp939-201ENSMUST00000061201 2131 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col8a1Q00780 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm37321-201ENSMUST00000195742 1872 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col8a1Q00780 Gm43609-201ENSMUST00000199084 2712 ntBASIC6.56□□□□□ -1.36
Col8a1Q00780 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm24195-201ENSMUST00000116804 137 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm13702-201ENSMUST00000118542 825 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm12174-201ENSMUST00000119853 813 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm14413-201ENSMUST00000122158 408 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.55□□□□□ -1.36
Col8a1Q00780 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm23819-201ENSMUST00000158744 109 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm23059-201ENSMUST00000158978 107 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm7244-201ENSMUST00000164658 455 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm6838-201ENSMUST00000172851 582 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms