Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm13641-201ENSMUST00000117993 473 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Gm7212-201ENSMUST00000120817 348 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm22262-201ENSMUST00000158713 86 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Mir5107-201ENSMUST00000175586 88 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Mir6348-201ENSMUST00000183804 120 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm8581-201ENSMUST00000188636 890 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm18839-201ENSMUST00000204292 670 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm8256-203ENSMUST00000228692 591 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm15732-201ENSMUST00000079794 480 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col18a1P39061 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col18a1P39061 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col18a1P39061 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 CT009604.1-201ENSMUST00000223900 1328 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 AC123832.1-201ENSMUST00000214120 2371 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col18a1P39061 Gm11848-201ENSMUST00000121207 973 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 Gm24719-201ENSMUST00000157520 110 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 Mir6952-201ENSMUST00000185092 61 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Gm29519-201ENSMUST00000186994 398 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Gm18447-201ENSMUST00000187501 307 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC9.28□□□□□ -0.92
Col18a1P39061 CT485607.3-201ENSMUST00000213361 672 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Gm43496-201ENSMUST00000201682 3001 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.28□□□□□ -0.92
Col18a1P39061 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col18a1P39061 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Col18a1P39061 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col18a1P39061 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Gm24473-201ENSMUST00000104483 131 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Col18a1P39061 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC9.27□□□□□ -0.92
Col18a1P39061 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Col18a1P39061 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Gm20778-201ENSMUST00000178524 627 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Gm37430-201ENSMUST00000193039 196 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Gm20770-201ENSMUST00000193474 694 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Gm19035-202ENSMUST00000194575 959 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Gm7270-201ENSMUST00000195818 1128 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.92
Col18a1P39061 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 AC154861.1-201ENSMUST00000223767 800 ntBASIC9.27□□□□□ -0.92
Col18a1P39061 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Col18a1P39061 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col18a1P39061 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm6494-201ENSMUST00000218604 2298 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms