Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 CT009738.1-201ENSMUST00000219031 809 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 Gm5928-201ENSMUST00000221839 466 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 Gm8607-201ENSMUST00000221864 431 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 AC125405.2-201ENSMUST00000227862 383 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 AW822073-201ENSMUST00000075305 555 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Gm43789-201ENSMUST00000199275 2472 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 AC161247.1-201ENSMUST00000217744 2295 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.16□□□□□ -0.94
Hoxc9P09633 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Hoxc9P09633 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Hoxc9P09633 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxc9P09633 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.15□□□□□ -0.94
Hoxc9P09633 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.15□□□□□ -0.94
Hoxc9P09633 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm37328-201ENSMUST00000193191 640 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm44162-201ENSMUST00000203543 544 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm44538-201ENSMUST00000205615 348 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC9.15□□□□□ -0.94
Hoxc9P09633 AC107663.1-201ENSMUST00000224257 468 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Hoxc9P09633 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Hoxc9P09633 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Mir138-1-201ENSMUST00000083480 99 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Gm37465-201ENSMUST00000192845 3290 ntBASIC9.15□□□□□ -0.94
Hoxc9P09633 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Hoxc9P09633 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
Hoxc9P09633 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.15□□□□□ -0.95
Hoxc9P09633 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
Hoxc9P09633 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Hoxc9P09633 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Hoxc9P09633 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Hoxc9P09633 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm9030-201ENSMUST00000218405 2410 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm9029-201ENSMUST00000219232 2410 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm9575-201ENSMUST00000122140 1339 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm29784-201ENSMUST00000196217 406 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC9.14□□□□□ -0.95
Hoxc9P09633 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.14□□□□□ -0.95
Hoxc9P09633 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 AC138329.1-201ENSMUST00000225040 471 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 CT009711.4-201ENSMUST00000225685 198 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Hoxc9P09633 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hoxc9P09633 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxc9P09633 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Hoxc9P09633 Gm43128-201ENSMUST00000202212 1621 ntBASIC9.13□□□□□ -0.95
Hoxc9P09633 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxc9P09633 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxc9P09633 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxc9P09633 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Hoxc9P09633 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 197.9 ms