Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.06□□□□□ -0.96
NpcdF8VQB8 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm44289-201ENSMUST00000204144 1390 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm24048-201ENSMUST00000102411 106 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm26429-201ENSMUST00000104829 110 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm4919-201ENSMUST00000117825 604 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm6654-201ENSMUST00000118950 348 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Klra14-ps-201ENSMUST00000119532 802 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm12321-201ENSMUST00000121485 804 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm4540-201ENSMUST00000170669 429 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm22254-201ENSMUST00000179186 110 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm8609-201ENSMUST00000182967 998 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm36961-201ENSMUST00000191980 132 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm18996-201ENSMUST00000214851 755 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 AC151971.2-201ENSMUST00000217540 909 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm6436-201ENSMUST00000077163 451 ntBASIC9.05□□□□□ -0.96
NpcdF8VQB8 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NpcdF8VQB8 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm15913-201ENSMUST00000118492 331 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm14000-201ENSMUST00000118670 233 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm12773-201ENSMUST00000120134 587 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm14925-201ENSMUST00000120611 438 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm12175-201ENSMUST00000122081 345 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm14713-201ENSMUST00000122362 686 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm13669-201ENSMUST00000122366 457 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm11188-201ENSMUST00000122382 388 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
NpcdF8VQB8 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm27218-201ENSMUST00000183745 392 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Mir6241-201ENSMUST00000184225 103 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Mir7033-201ENSMUST00000184259 81 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm28885-201ENSMUST00000185615 563 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 Gm44571-201ENSMUST00000208092 533 ntBASIC9.04□□□□□ -0.96
NpcdF8VQB8 AC151901.1-201ENSMUST00000218274 180 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms