Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm12939-201ENSMUST00000117303 165 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm13357-201ENSMUST00000120528 537 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm11472-201ENSMUST00000121305 556 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm5456-201ENSMUST00000170706 844 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm17045-201ENSMUST00000178600 844 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm21877-201ENSMUST00000185640 694 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm37383-201ENSMUST00000191750 745 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Scn3aA2ASI5 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm11609-201ENSMUST00000121926 793 ntBASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm4956-202ENSMUST00000178869 672 ntBASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm29464-201ENSMUST00000187692 513 ntBASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm18012-201ENSMUST00000204558 773 ntBASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.84□□□□□ -1.16
Scn3aA2ASI5 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm37040-201ENSMUST00000191740 1824 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm12135-201ENSMUST00000119170 466 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm23968-201ENSMUST00000175047 125 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm43141-201ENSMUST00000199695 274 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm46203-201ENSMUST00000218130 478 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Scn3aA2ASI5 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Scn3aA2ASI5 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms