Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm13487-201ENSMUST00000122240 864 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm29240-201ENSMUST00000187248 286 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm37883-201ENSMUST00000194970 725 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm7368-201ENSMUST00000213307 367 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm10126-201ENSMUST00000221732 168 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm26063-201ENSMUST00000083378 107 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm23734-201ENSMUST00000083753 109 ntBASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rab11fip3Q8CHD8 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC9.4□□□□□ -0.91
Rab11fip3Q8CHD8 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Rab11fip3Q8CHD8 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Rab11fip3Q8CHD8 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.4□□□□□ -0.91
Rab11fip3Q8CHD8 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 AC122426.2-201ENSMUST00000216522 2947 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm26417-201ENSMUST00000104274 135 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm25379-201ENSMUST00000104338 114 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm11903-201ENSMUST00000118958 727 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm15007-201ENSMUST00000119982 710 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm14380-201ENSMUST00000122298 431 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm22024-201ENSMUST00000122733 287 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm24057-201ENSMUST00000158616 302 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm27014-201ENSMUST00000182658 937 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm42983-201ENSMUST00000199879 815 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm8058-201ENSMUST00000217247 587 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 AC121997.2-202ENSMUST00000227158 939 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm45786-201ENSMUST00000213021 2278 ntBASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Rab11fip3Q8CHD8 Gm37043-201ENSMUST00000194609 3105 ntBASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm14251-201ENSMUST00000122133 279 ntBASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm4613-201ENSMUST00000165488 276 ntBASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm3760-201ENSMUST00000167475 804 ntBASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rab11fip3Q8CHD8 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms