Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Nup88Q8CEC0 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.37□□□□□ -1.07
Nup88Q8CEC0 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm23437-201ENSMUST00000104036 127 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm25344-201ENSMUST00000104503 132 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm8046-201ENSMUST00000172151 616 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm27684-201ENSMUST00000183778 80 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm43147-201ENSMUST00000196944 542 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Olfr683-201ENSMUST00000061284 960 ntBASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Nup88Q8CEC0 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm16027-201ENSMUST00000161618 758 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm29383-201ENSMUST00000188284 480 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm37322-201ENSMUST00000193409 337 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm34144-201ENSMUST00000197039 259 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm22504-201ENSMUST00000082963 139 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup88Q8CEC0 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.34□□□□□ -1.07
Nup88Q8CEC0 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms